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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902592.1_cds_XP_016452625.1_46844
CDS Infomation

[gene=LOC107777151] [db_xref=GeneID:107777151] [protein=ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X2] [protein_id=XP_016452625.1] [location=complement(join(19070,19991..20193,21523..21611,21703..21737,24498..24570,24730..24775,25491..25583,25712..25826,28961..29065,29157..29275))] [gbkey=CDS]
Sequence

ATGGCCCATTCGTGCGTGGCCACGACTTCCTCTATCTCTAAATTCAACTTCTCCTCTGAC
TCCTCTACTATTCGTGAAGCTTACCCTAATACCCTCTCCTTTAAGACCCTTCAGTTCAGG
AATTTAAAGGTGAAGAATCGGGGAAAGAGTACAGTGAAGGCCGTGTACTCTGGAGCCAAC
TGGGATTCTGGAATTACTTCACCAACTGGGATTTGGTCTATAAGAGATGACTTGCAAGTT
CCATCATCGCCCTATTTTCCTGCTTATGCCCAAGGTCAAGGACCACCTCCAATGGTGCAA
GAGCGGTTTATGAGTGTGATCAGCCAGCTCTTCCAATATAGGATCATACGATGTGGTGGG
GCAGTTGATGACGATATGGCAAATATTATAGTTGCTCAGCTTCTCTATCTTGACGCTGTT
GATCCAACAAAGGATATTGTCATGTATGTCAACTCTCCAGGAGGGTCAGTTACAGCAGGA
ATGGCCATTTTTGATACCATGCGTCATATTCGGCCTGATGTCTCCACCGTTTGTGTTGGA
CTCGCTGCGAGTATGGGGGCTTTTCTTCTTAGCGCTGGCACCAAAGGTAAGAGATATAGC
CTGCCAAACTCGAGGATAATGATTCACCAACCTCTTGGTGGTGCACAAGGTGGGCAAACT
GATATAGACATTCAGGCTAATGAGATGTTGCATCACAAAGCAAATCTGAATGGGTACCTT
GCCTACCATACTGGTCAAAGCCTTGAGAAGATCAACCAAGATACCGATCGTGATTTTTTC
ATGAGTGCAAAGGAAGCTAAAGACTATGGGCTCATTGATGGAGTCATCTTGAACCCCATG
AAAGCCCTTCAACCAATTGCAGCAGCTGCTGAACAATAA

Peptide Sequence

PEP ID

XP_016452625.1
PEP Infomation

PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAHSCVATTSSISKFNFSSDSSTIREAYPNTLSFKTLQFRNLKVKNRGKSTVKAVYSGAN
WDSGITSPTGIWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFMSVISQLFQYRIIRCGG
AVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVG
LAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL
AYHTGQSLEKINQDTDRDFFMSAKEAKDYGLIDGVILNPMKALQPIAAAAEQ

Transcript Sequence

Gene sequence data has not been registered.